Explorando el poder de los abordajes transcriptómicos para identificar biomarcadores asociados a daño renal en pacientes con lupus eritematoso sistémico
datacite.identifier.uri | https://revistanefrologia.org/index.php/rcn/article/view/492 | |
datacite.rights | http://purl.org/coar/access_right/c_abf2 | spa |
dc.contributor.author | Arrieta Bravo, Valentina | |
dc.contributor.author | Rangel Gómez, Tiffany | |
dc.contributor.author | Pacheco Lugo, Lisandro | |
dc.date.accessioned | 2022-01-26T16:26:23Z | |
dc.date.available | 2022-01-26T16:26:23Z | |
dc.date.issued | 2021 | |
dc.description.abstract | El lupus eritematoso sistémico (LES) es una enfermedad compleja y altamente heterogénea que afecta múltiples órganos, incluyendo articulaciones, corazón, sistema hematopoyético, sistema nervioso y riñón, siendo este último el de peor pronóstico y el que conlleva a nefritis lúpica (NL). Aunque la etiopatogénesis del LES aún no se conoce con claridad, se cree que la susceptibilidad genética y las modificaciones epigenéticas aberrantes favorecen su desenlace. Para establecer una terapia precisa es necesario evaluar de manera eficiente y objetiva el compromiso de órganos y la actividad de la enfermedad, lo cual es muy difícil por las pocas pruebas de laboratorio clínico disponibles en la actualidad. En las últimas décadas la búsqueda de nuevos biomarcadores de LES ha sido una tendencia y se han identificado varios promisorios a nivel de genómica, metabolómica, proteómica y transcriptómica. En esta revisión se resume el estado del arte relacionado con estudios transcriptómicos que han identificado diversos transcritos potencialmente útiles como biomarcadores del LES y la NL | spa |
dc.description.abstract | Systemic Lupus Erythematosus is a complex and highly heterogeneous disease affecting multiple organs such as joints, heart, hematopoietic system, nervous system and kidney, the latter being the worst prognosis and leading to lupus nephritis (LN). While the etiopathogenesis of SLE is still not completely clear, is believed that genetic susceptibility and aberrant epigenetic modifications favor the outcome of the disease. In order to establish an accurate therapy, it is necessary to efficiently and objectively assess organ involvement and disease activity, which is very dificult due to the clinical laboratory tests currently available. In recent decades, the search for new SLE biomarkers has been a trend and many promising biomarkers have been identified at the genomic, metabolomic, proteomic and transcriptomic levels. In this review we summarize the state of the art related to transcriptomic studies that have identified various potentially useful transcripts as biomarkers of SLE and NL. | eng |
dc.description.sponsorship | Systemic Lupus Erythematosus is a complex and highly heterogeneous disease affecting multiple organs such as joints, heart, hematopoietic system, nervous system and kidney, the latter being the worst prognosis and leading to lupus nephritis (LN). While the etiopathogenesis of SLE is still not completely clear, is believed that genetic susceptibility and aberrant epigenetic modifications favor the outcome of the disease. In order to establish an accurate therapy, it is necessary to efficiently and objectively assess organ involvement and disease activity, which is very dificult due to the clinical laboratory tests currently available. In recent decades, the search for new SLE biomarkers has been a trend and many promising biomarkers have been identified at the genomic, metabolomic, proteomic and transcriptomic levels. In this review we summarize the state of the art related to transcriptomic studies that have identified various potentially useful transcripts as biomarkers of SLE and NL. | spa |
dc.format.mimetype | spa | |
dc.identifier.doi | https://doi.org/10.22265/acnef.8.1.492 | |
dc.identifier.issn | 25005006 | |
dc.identifier.uri | https://hdl.handle.net/20.500.12442/9307 | |
dc.language.iso | spa | spa |
dc.publisher | Asociación Colombiana de Nefrología e hipertensión Arterial | spa |
dc.publisher | Facultad de Ciencias de la Salud | spa |
dc.rights | Attribution-NonCommercial-NoDerivatives 4.0 Internacional | eng |
dc.rights.accessrights | info:eu-repo/semantics/openAccess | spa |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ | |
dc.source | Vol. 8, Num. 1 (2021) | spa |
dc.source | Revista Colombiana de Nefrología. Rev. Colomb. Nefrol. | spa |
dc.subject | Lupus eritematoso sistémico | spa |
dc.subject | Nefritis lúpica | spa |
dc.subject | Biomarcadores | spa |
dc.subject | MicroARNs | spa |
dc.subject | Systemic lupus erythematosus | eng |
dc.subject | Lupus nephritis | eng |
dc.subject | Biomarkers | eng |
dc.subject | MicroRNAs | eng |
dc.title | Explorando el poder de los abordajes transcriptómicos para identificar biomarcadores asociados a daño renal en pacientes con lupus eritematoso sistémico | spa |
dc.title.translated | Exploring the power of transcriptomic approaches to identify biomarkers associated to renal damage in Systemic Lupus Erythematosus patients | eng |
dc.type.driver | info:eu-repo/semantics/article | spa |
dc.type.spa | Artículo científico | spa |
dcterms.references | Honarpisheh M, Köhler P, von Rauchhaupt E, Lech M. The Involvement of MicroRNAs in Modulation of Innate and Adaptive Immunity in Systemic Lupus Erythematosus and Lupus Nephritis. J Immunol Res. 2018;2018:4123106. https://dx.doi.org/10.1155/2018/4126106 | eng |
dcterms.references | Zhu H, Mi W, Luo H, Chen T, Liu S, Raman I, et al. Whole-genome transcription and DNA methylation analysis of peripheral blood mononuclear cells identified aberrant gene regulation pathways in systemic lupus erythematosus. Arthritis Res Ther. 2016;18(1):162. https://dx.doi.org/10.1186/s13075-016-1050-x | eng |
dcterms.references | Koutsokeras T, Healy T. Systemic lupus erythematosus and lupus nephritis. Nat Rev Drug Discov. 2014;13(3):173-4. https://dx.doi.org/10.1038/nrd4227 | eng |
dcterms.references | Arroyo AR, García R, Aroca G, Cadena A, Acosta J. Correlación clínica e inmunohistopatológica de la nefropatía lúpica en un centro de referencia del Caribe colombiano durante los años 2012 a 2013. Rev Colomb Nefrol. 2014;1(2):57-64. https://dx.doi.org/10.22265/ acnef.1.2.176 | spa |
dcterms.references | Coit P, Renauer P, Je ries MA, Merrill JT, McCune WJ, Maksimowicz- McKinnon K, et al. Renal involvement in lupus is characterized by unique DNA methylation changes in naïve CD4+ T cells. J Autoimmun. 2015;61:29-35. https://dx.doi.org/10.1016/j.jaut.2015.05.003 | eng |
dcterms.references | Meliambro K, Campbell KN, Chung M. Therapy for Proliferative Lupus Nephritis. Rheum Dis Clin North Am. 2018;44(4):545-60. https://dx.doi.org/10.1016/j.rdc.2018.06.002 | eng |
dcterms.references | Schwartz N, Goilav B, Putterman C. The pathogenesis, diagnosis and treatment of lupus nephritis. Curr Opin Rheumatol. 2014;26(5):502-9. https://dx.doi.org/10.1097/BOR. 0000000000000089 | eng |
dcterms.references | Zumerle S, Alimonti A. In and out from senescence. Nat Cell Biol. 2020;22(7):753-4. https: //dx.doi.org/10.1038/s41556-020-0540-x | eng |
dcterms.references | Guo Y, Zhao M, Lu Q. Transcription factor RFX1 is ubiquitinated by E3 ligase STUB1 in systemic lupus erythematosus. Clin Immunol. 2016;169:1-7. https://dx.doi.org/10.1016/j.clim. 2016.06.003 | eng |
dcterms.references | Luo J, Niu X, Liu H, Zhang M, Chen M, Deng S. Up-regulation of transcription factor Blimp1 in systemic lupus erythematosus. Mol Immunol. 2013;56(4):574-82. https://dx.doi.org/ 10.1016/j.molimm.2013.05.241 | eng |
dcterms.references | Ban T, Sato GR, Tamura T. Regulation and role of the transcription factor IRF5 in innate immune responses and systemic lupus erythematosus. Int Immunol. 2018;30(11):529-36. https://dx.doi.org/10.1093/intimm/dxy032 | eng |
dcterms.references | Jiang T, Tian F, Zheng H, Whitman SA, Lin Y, Zhang Z, et al. Nrf2 suppresses lupus nephritis through inhibition of oxidative injury and the NF-κB-mediated inflammatory response. Kidney Int. 2014;85(2):333-43. https://dx.doi.org/10.1038/ki.2013.343 | eng |
dcterms.references | Mathenia J, Reyes-Cortes E, Williams S, Molano I, Ruiz P, Watson DK, et al. Impact of Fli1 transcription factor on autoantibody and lupus nephritis in NZM2410 mice: Effect of Fli-1 gene on lupus in NZM2410 mice. Clin Exp Immunol. 2010;162(2):362-71. https://dx.doi.org/ 10.1111/j1365-2249.2010.04245.x | eng |
dcterms.references | Sui W, Hou X, Che W, Yang M, Dai Y. The applied basic research of systemic lupus erythematosus based on the biological omics. Genes Immun. 2013;14(3):133- 46. https://dx.doi.org/ 10.1038/gene.2013.3 | eng |
dcterms.references | Sui W, Lin H, Chen J, Ou M, Dai Y. Comprehensive analysis of transcription factor expression patterns in peripheral blood mononuclear cell of systemic lupus erythematosus. Int J Rheum Dis. 2012;15(2):212-9 | eng |
dcterms.references | Kuo CC, Lin SC. Altered FOXO1 Transcript Levels in Peripheral Blood Mononuclear Cells of Systemic Lupus Erythematosus and Rheumatoid Arthritis Patients. Mol Med. 2007;13(11- 12):561-6. https://dx.doi.org/10.2119/2007-00021.Kuo | eng |
dcterms.references | Frangou EA, Bertsias GK, Boumpas DT. Gene expression and regulation in systemic lupus erythematosus. Eur J Clin Invest. 2013;43(10):1084-96. https://dx.doi.org/10.1111/eci.12130 | eng |
dcterms.references | Wu H, Zeng J, Yin J, Peng Q, Zhao M, Lu Q. Organ-speci c biomarkers in lupus. Autoimmun Rev. 2017;16(4):391-7 | eng |
dcterms.references | Li Y, Fang X, Li Q-Z. Biomarker Pro ling for Lupus Nephritis. Genomics Proteomics Bioinformatics. 2013;11(3):158-65. https://dx.doi.org/10.1016/j.gpb.2013.05.003 | eng |
dcterms.references | Stagakis E, Bertsias G, Verginis P, Nakou M, Hatziapostolou M, Kritikos H, et al. Identi - cation of novel microRNA signatures linked to human lupus disease activity and pathogenesis: miR-21 regulates aberrant T cell responses through regulation of PDCD4 expression. Ann Rheum Dis. 2011;70(8):1496-506. https://dx.doi.org/10.1136/ard.2010.139857 | eng |
dcterms.references | Navarro-Quiroz E, Pacheco-Lugo L, Lorenzi H, Díaz-Olmos Y, Almendrales L, Rico E, et al. High-Throughput Sequencing Reveals Circulating miRNAs as Potential Biomarkers of Kidney Damage in Patients with Systemic Lupus Erythematosus. PLoS One. 2016;11(11):e0166202. https://dx.doi.org/10.1371/journal.pone.0166202 | eng |
dcterms.references | Navarro-Quiroz E, Navarro-Quiroz R, Pacheco-Lugo L, Aroca-Martínez G, GómezEscorcia L, González-Torres H, et al. Integrated analysis of microRNA regulation and its interaction with mechanisms of epigenetic regulation in the etiology of systemic lupus erythematosus. PLoS One. 2019;14(6):e0218116. https://dx.doi.org/10.1371/journal.pone.0218116 | eng |
dcterms.references | Navarro-Quiroz E, Pacheco-Lugo L, Navarro-Quiroz R, Lorenzi H, España- Puccini P, Díaz-Olmos Y, et al. Pro ling analysis of circulating microRNA in peripheral blood of patients with class IV lupus nephritis. PLoS One. 2017;12(11):e0187973. https://dx.doi.org/ 10.1371/journal.pone.0187973 | eng |
dcterms.references | Martínez-Ramos R, García-Lozano JR, Lucena JM, Castillo-Palma MJ, García- Hernández F, Rodríguez MC, et al. Di erential expression pattern of microRNAs in CD4+ and CD19+ cells from asymptomatic patients with systemic lupus erythematosus. Lupus. 2014;23(4):353-9. https://dx.doi.org/10.1177/0961203314522335 | eng |
dcterms.references | Kusaoi M, Yamaji K, Ishibe Y, Murayama G, Nemoto T, Sekiya F, et al. Separation of Circulating MicroRNAs Using Apheresis in Patients With Systemic Lupus Erythematosus. Ther Apher Dial. 2016;20(4):348-53. https://dx.doi.org/10.1111/1744-9987.12471 | eng |
dcterms.references | Jafari-Ghods F, Topal-Sarikaya A, Arda N, Hamuryudan V. MiRNA and mRNA Profling in Systemic Lupus Reveals a Novel Set of Cytokine - Related miRNAs and their Target Genes in Cases With and Without Renal Involvement. Kidney Blood Press Res. 2017;42(6):1322-37. https://dx.doi.org/10.1159/000485987 | eng |
dcterms.references | Te JL, Dozmorov IM, Guthridge JM, Nguyen KL, Cavett JW, Kelly JA, et al. Identification of unique microRNA signature associated with lupus nephritis. PloS One. 2010;5(5):e10344. https://dx.doi.org/10.1371/journal.pone.0010344 | eng |
dcterms.references | Carlsen AL, Schetter AJ, Nielsen CT, Lood C, Knudsen S, Voss A, et al. Circulating MicroRNA Expression Profles Associated With Systemic Lupus Erythematosus. Arthritis Rheum. 2013;65(5):1324-34. https://dx.doi.org/10.1002/art.37890 | eng |
dcterms.references | Lu J, Kwan BC, Lai FM, Tam LS, Li EK, Chow K, et al. Glomerular and tubulointerstitial miR-638, miR-198 and miR-146a expression in lupus nephritis: miRNA in lupus nephritis. Nephrology (Carlton). 2012;17(4):346-51. https://dx.doi.org/10.1111/j.1440-1797.2012.01573.x | eng |
dcterms.references | Rudnicki M, Perco P, D’haene B, Leierer J, Heinzel A, Mühlberger I, et al. Renal microRNA- and RNA-profiles in progressive chronic kidney disease. Eur J Clin Invest. 2016;46(3):213-26. https://dx.doi.org/10.1111/eci.12585 | eng |
dcterms.references | Trionfini P, Benigni A, Remuzzi G. MicroRNAs in kidney physiology and disease. Nat Rev Nephrol. 2015;11(1):23-33. https://dx.doi.org/10.1038/nrneph.2014.202 | eng |
dcterms.references | Krasoudaki E, Stagakis E, Loupasakis K, Papagianni A, Alexopoulos E, Bertsias G, et al. SAT0006 Microrna analysis of human lupus nephritis: Evidence for modulation of kallikrein 4 by MIR-422A. Ann Rheum Dis. 2013;71(Suppl 3):472- 3. https://dx.doi.org/10.1136/ annrheumdis-2012-eular.2954 | eng |
dcterms.references | Rai R, Chauhan SK, Singh VV, Rai M, Rai G. RNA-seq Analysis Reveals Unique Transcriptome Signatures in Systemic Lupus Erythematosus Patients with Distinct Autoantibody Specificities. PLoS One. 2016;11(11):e0166312. https://dx.doi.org/10.1371/journal.pone. 0166312 | eng |
dcterms.references | Chauhan SK, Singh VV, Rai R, Rai M, Rai G. Distinct Autoantibody Pro les in Systemic Lupus Erythematosus Patients are Selectively Associated with TLR7 and TLR9 Upregulation. J Clin Immunol. 2013;33(5):954-64. https://dx.doi.org/10.1007/s10875-013-9887-0 | eng |
dcterms.references | Chauhan SK, Singh VV, Rai R, Rai M, Rai G. Di erential microRNA Profile and PostTranscriptional Regulation Exist in Systemic Lupus Erythematosus Patients with Distinct Autoantibody Specificities. J Clin Immunol. 2014;34(4):491-503. https://dx.doi.org/10.1007/ s10875-014-0008-5 | eng |
dcterms.references | Rai R, Chauhan SK, Singh VV, Rai M, Rai G. Heat shock protein 27 and its regulatory molecules express differentially in SLE patients with distinct autoantibody profiles. Immunol Lett. 2015;164(1):25-32. https://dx.doi.org/10.1016/j.imlet.2015.01.007 | eng |
dcterms.references | Bramham K, Mistry HD, Poston L, Chappell LC, Thompson AJ. The non- invasive biopsy– will urinary proteomics make the renal tissue biopsy redundant? QJM. 2009;102(8):523-38. https://dx.doi.org/10.1093/qjmed/hcp071 | eng |
dcterms.references | Magalhães P, Pejchinovski M, Markoska K, Banasik M, Klinger M, Švec-Billá D, et al. Association of kidney fibrosis with urinary peptides: a path towards non- invasive liquid biopsies? Sci Rep. 2017;7(1):16915. https://dx.doi.org/10.1038/s41598-017-17083-w | eng |
dcterms.references | Pacheco-Lugo L, Díaz-Olmos Y, Aroca-Martínez G. Biomarcadores en fuídos biológicos y su potencial uso como indicadores de nefritis lúpica en individuos con lupus eritematoso sistémico. Rev Colomb Nefrol. 2014;1(1):39-47. https://dx.doi.org/10.22265/acnef.1.1.171 | spa |
dcterms.references | Cárdenas-González M, Srivastava A, Pavkovic M, Bijol V, Rennke HG, Stillman IE, et al. Identification, Con rmation, and Replication of Novel Urinary MicroRNA Biomarkers in Lupus Nephritis and Diabetic Nephropathy. Clin Chem. 2017;63(9):1515-26. https://dx.doi. org/10.1373/clinchem.2017.274175 | eng |
dcterms.references | Abulaban KM, Fall N, Nunna R, Ying J, Devarajan P, Grom A, et al. Relationship of cell-free urine MicroRNA with lupus nephritis in children. Pediatr Rheumatol Online J. 2016;14(1):4. https://dx.doi.org/10.1186/s12969-016-0064-x | eng |
dcterms.references | Santiago-Dieppa DR, Steinberg J, Gonda D, Cheung VJ, Carter BS, Chen CC. Extracellular vesicles as a platform for ‘liquid biopsy’ in glioblastoma patients. Expert Rev Mol Diagn. 2014;14(7):819-25. https://dx.doi.org/10.1586/14737159.2014.943193 | eng |
dcterms.references | Chun-Yan L, Zi-Yi Z, Tian-Lin Y, Yi-Li W, Bao L, Jiao L, et al. Liquid biopsy biomarkers of renal interstitial fibrosis based on urinary exosome. Exp Mol Pathol. 2018;105(2):223-8. https://dx.doi.org/10.1016/j.yexmp.2018.08.004 | eng |
dcterms.references | Solé C, Cortés-Hernández J, Felip ML, Vidal M, Ordi-Ros J. miR-29c in urinary exosomes as predictor of early renal fibrosis in lupus nephritis. Nephrol Dial Transplant. 2015;30(9):1488-96. https://dx.doi.org/10.1093/ndt/gfv128 | eng |
dcterms.references | Garcia-Vives E, Solé C, Moliné T, Vidal M, Agraz I, Ordi-Ros J, et al. The Urinary Exosomal miRNA Expression Profile is Predictive of Clinical Response in Lupus Nephritis. Int J Mol Sci. 2020;21(4):1372. https://dx.doi.org/10.3390/ijms21041372 | eng |
dcterms.references | Solé C, Moliné T, Vidal M, Ordi-Ros J, Cortés-Hernández J. An Exosomal Urinary miRNA Signature for Early Diagnosis of Renal Fibrosis in Lupus Nephritis. Cells. 2019;8(8):773. https://dx.doi.org/10.3390/cells8080773 | eng |
dcterms.references | Li Y, Xu X, Tang X, Bian X, Shen B, Zhao H, et al. MicroRNA expression pro le of urinary exosomes in Type IV lupus nephritis complicated by cellular crescent. J Biol Res (Thessalon). 2018;25(1):16. https://dx.doi.org/10.1186/s40709-018-0088-0 | eng |
dcterms.references | Guan J, Wang G, Tam LS, Kwan BCH, Li EKM, Chow KM, et al. Urinary sediment ICAM-1 level in lupus nephritis. Lupus. 2012;21(11):1190-5. https://dx.doi.org/10.1177/ 0961203312451334 | eng |
dcterms.references | Jakiela B, Kosałka J, Plutecka H, Węgrzyn AS, Bazan-Socha S, Sanak M, et al. Urinary cytokines and mRNA expression as biomarkers of disease activity in lupus nephritis. Lupus. 2018;27(8):1259-70. https://dx.doi.org/10.1177/0961203318770006 | eng |
dcterms.references | Perez-Hernandez J, Forner MJ, Pinto C, Chaves FJ, Cortes R, Redon J. Increased Urinary Exosomal MicroRNAs in Patients with Systemic Lupus Erythematosus. PLoS One. 2015;10(9):e0138618. https://dx.doi.org/10.1371/journal.pone.0138618 | eng |
oaire.version | info:eu-repo/semantics/publishedVersion | spa |
sb.programa | Medicina | spa |
sb.sede | Sede Barranquilla | spa |
Archivos
Bloque original
1 - 1 de 1
No hay miniatura disponible
- Nombre:
- PDF.pdf
- Tamaño:
- 482.03 KB
- Formato:
- Adobe Portable Document Format